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Gene Expression Analyzer

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No Screenshot PaGE (Patterns from Gene Expression) 5.0.1
PaGE (Patterns from Gene Expression) is free downloadable program for microarray analisys. PaGE can be used to produce sets of differentially expressed genes with confidence measures attached. These lists are generated the False Discovery Rate method of controlling the false positives.But PaGE is more than a differential expression analysis tool. PaGE is a software to attach descriptive , dependable, and easily interpretable expression...
Price: USD $0.00;   License: Freeware   File Size: 3594 KB;
Platform: Windows

No Screenshot Venn Mapper 1.01
The application loads microarray data (gene expression ratios) and determines which genes are up- or downregulated by a user-defined ratio cut-off level. For each experiment, lists of differentially expressed genes are computed. Every list will be compared to every other list, and the number of co-occurring genes will be calculated. With the use of the binomial distribution, so called z-values can be assigned to the overlap found between two...
Price: USD $0.00;   License: Freeware  
Platform: Windows 3.x, Windows , All

Analyzer - Venn Mapper - Microarray Data Analysis - Gene Expression Analyzer - Analyze Gene - Gene Expression - Microarray Data
No Screenshot Gene Explorer 1.3
Simulate gene expression fast and easy. Gene Explorer is an interactive simulation of gene expression that allows the user to:1. Explore a sample gene:* Explore the correspondence between DNA, pre-mRNA, mature mRNA, and protein* Map the functional elements of a gene.2. Create mutations in a gene and explore their effects.3. Design a gene of their own and see how it is expressed.The figure above shows the Gene Explorer display:1. The DNA...

Price: USD $0.00;   License: Freeware   File Size: 70 KB;
Platform: Windows

No Screenshot MeV 4.6.2 r2536
MeV or Multiple Experiment Viewer is a Java tool to help you with microarray gene expression data analysis. MeV supports 5 input formats, and provides an intuitive graphical interface for clustering, classification, statistical analysis and theme discovery.

Price: USD $0.00;   License: Freeware   File Size: 65638 KB;
Platform: Windows XP, Windows, Windows Vista , Windows Vista x64,Windows 7,Windows 7 x64

Analysis - Analyze - Analyzer - Data Analyzer - Analyze Data - Microarray Gene Analysis
No Screenshot MeV for Mac OS X 4.6.2 r2536
MeV or Multiple Experiment Viewer is a Java tool to help you with microarray gene expression data analysis. MeV supports 5 input formats, and provides an intuitive graphical interface for clustering, classification, statistical analysis and theme discovery.

Price: USD $0.00;   License: Freeware   File Size: 21094 KB;
Platform: Mac, Linux

Analysis - Analyze - Analyzer - Data Analyzer - Analyze Data - Microarray Gene Analysis
No Screenshot LeMoNe 2.5.1
Gene expression data analysis made easy. LeMoNe is for Learning Module Networks from gene expression data.The purpose of the LeMoNe program package is to create a module network from expression data. The end result is a set of gene clusters (co-expressed genes), and their associated regulators.Please Note: this software is free for academic use only.Requirements:* Java

Price: USD $0.00;   License: Freeware   File Size: 22394 KB;
Platform: Windows

Analysis - Research - Peer - Sequence - Genome - Gene - Van - Biological - Duplication - De
No Screenshot GeneLinker Gold 3.1
Scalable desktop software for visualization, analysis and classification of gene expression and proteomics data to provide biologists accessible data analysis and data mining.

Price: USD $995.00;   License: Shareware (Free to Try)  
Platform: Unknown

No Screenshot CLC Main Workbench 6.5 Build 65005
Main Workbench includes all features from CLC DNA Workbench, CLC RNA Workbench, and CLC Protein Workbench, as well as a range of Gene Expression Analysis. CLC Main Workbench creates a software environment enabling users to make a large number of advanced protein sequence analyses, combined with smooth data management, and excellent graphical viewing and output options. CLC Main Workbench allows you to analyze DNA Sequences.

Price: USD $0.00;   License: Freeware  
Platform: Windows XP, Windows, Windows Vista, Mac OS 7.x, Mac , Windows 2K,XPX64,Vista64,7x64

Analyze - Sequence - Protein - Protein Sequence - DNA Sequence - CLC Main Workbench
No Screenshot Cytoscape 2.8.2
Cytoscape is an open source program platform for visualizing complex-networks and integrating these with any type of attribute data. A lot of plugins are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.An open source bioinformatics program platform for visualizing molecular interaction networks and biological pathways and integrating these networks with annotations, gene...

Price: USD $0.00;   License: Freeware   File Size: 89282 KB;
Platform: Windows

Software - Graph - Visualization - Expression - Genetic - Gene - Int - Clustering - Bioinformatics - Cytoscape
No Screenshot SynTReN 1.1.3
SynTReN is a generator of synthetic gene expression data for design and analysis of structure learning algorithms. Create synthetic gene expression data fast and easy.This network generation technique offers a valid alternative to existing methods. The topological characteristics of the generated networks more closely resemble the characteristics of real transcriptional networks. Simulation of the network scales well to large networks. The...

Price: USD $0.00;   License: Freeware   File Size: 2467 KB;
Platform: Windows

No Screenshot dChip 1.0
Gene expression microarrays analysis made easy. dChip is for probe-level like the Affymetrix platform and high-level analysis of gene expression microarrays and SNP microarrays.Gene expression or SNP data from various microarray platforms can also be analyzed by importing as external dataset. At the probe level, dChip can display and normalize the CEL files, and the model-based approach allows pooling information across multiple arrays and...

Price: USD $0.00;   License: Freeware   File Size: 2140 KB;
Platform: Windows

No Screenshot Genevar 2.0.1
Gene expression analysis made easy. Genevar integrate multiple datasets, and provides analysis and visualization of associations between sequence variation and gene expression in eQTL studies.Genevar allows researchers to investigate eQTL (expression quantitative trait loci) associations within a gene locus of interest in real time. The database and software can be installed on a standard computer in database mode and, in addition, on a server...

Price: USD $0.00;   License: Freeware   File Size: 0 KB;
Platform: Windows

Bioinformatics - Cambridge - Genome Sequencing - Research Institute - Human Genome - Wellcome Trust - Sanger Institute - Genetic Variation
No Screenshot AlleleID 7.01
AlleleID is a comprehensive desktop tool designed to address the challenges of pathogen detection, bacterial identification or taxa/species discrimination using microarrays and TaqMan® and molecular beacon qPCR assays. With ClustalW multiple sequence alignment at its core, AlleleID can design species specific/cross species probes for microarrays or TaqMan®/molecular beacon qPCR assays. You could use both the techniques; verify...

Price: USD $0.00;   License: Demo  
Platform: Mac

Bacterial Identification - SNP Detection - Premier Biosoft - Gene Splicing - Alternative Splicing - Species Identification - Strain Detection - Survival Analysis - Glycosylation - Kaplan Meier Survival
No Screenshot Amiba 1.0
The Gene Expression Programming Framework in Java.It separates the process of evolution from the process of interpretation of the chromosome, allowing the use of various schemes in the chromosome.

Price: USD $0.00;   License: Freeware   File Size: 2099 KB;
Platform: Windows, Mac, Linux

No Screenshot EPTable 0.1.1
EPTable is a simple web-based tool to analyze microarray gene expression profiles with additional gene profiles.

Price: USD $0.00;   License: Freeware   File Size: 20 KB;
Platform: Mac, Linux , BSD

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